STRINGSTRING
pco129593 protein (Zea mays) - STRING interaction network
"pco129593" - LOC100283983 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco129593LOC100283983 (533 aa)    
Predicted Functional Partners:
GRMZM2G147671_P01
26S proteasome non-ATPase regulatory subunit 4 (401 aa)
     
 
  0.910
pco129004
LOC100281651 (214 aa)
       
 
  0.826
GRMZM2G170843_P02
Ubiquilin-1 (576 aa)
     
 
0.805
GRMZM2G136769_P01
Hypothetical protein LOC100382017 (578 aa)
     
 
0.804
PEP4
Phosphoenolpyruvate carboxylase 2 (PEPCase 2)(PEPC 2)(EC 4.1.1.31); Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (967 aa)
     
   
  0.726
Zm.32438
22.0 kDa class IV heat shock protein (217 aa)
           
  0.721
GRMZM2G178254_P01
Hypothetical protein LOC100191571 (415 aa)
           
  0.721
pco110021
40S ribosomal protein S27a (155 aa)
           
  0.721
cl8663_2a
Hypothetical protein LOC100193488 (249 aa)
           
  0.710
pco129049
Hypothetical protein LOC100304380 (495 aa)
       
      0.648
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (15%) [HD]