• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G127232_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G127232_P01" - Gibberellin 20 oxidase 2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G127232_P01Gibberellin 20 oxidase 2 ; Belongs to the iron/ascorbate-dependent oxidoreductase family (299 aa)    
Predicted Functional Partners:
pco099340a
Aldolase-type TIM barrel family protein; Oxidoreductase; Uncharacterized protein (338 aa)
     
   
  0.713
arftf20
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1147 aa)
           
  0.598
100285090
E3 ubiquitin-protein ligase XBAT32; Uncharacterized protein; XBAT32 (484 aa)
           
  0.537
ARF16
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (914 aa)
           
  0.532
GRMZM5G831102_P02
Gibberellin receptor GID1L2 (346 aa)
   
     
  0.530
cr4
Putative receptor protein kinase CRINKLY4; Putative receptor protein kinase. Could play a role in a differentiation signal. The CRINKLY4 (CR4) mutation affects leaf epidermis differentiation such that cell size and morphology are altered, and surface functions are compromised, allowing graft- like fusions between organs (901 aa)
           
  0.482
103630068
Ethylene response sensor 1 (561 aa)
           
  0.482
100193891
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (459 aa)
           
  0.481
GRMZM2G173103_P01
Plastocyanin-like domain containing protein (220 aa)
           
  0.480
100501754
Putative cellulose synthase-like family protein ; Belongs to the glycosyltransferase 2 family (949 aa)
           
  0.480
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (6%) [HD]