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Zm.117486 protein (Zea mays) - STRING interaction network
"Zm.117486" - (E)-beta-caryophyllene synthase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.117486(E)-beta-caryophyllene synthase (528 aa)    
Predicted Functional Partners:
GRMZM2G119345_P01
ABC-2 type transporter family protein (667 aa)
           
  0.564
GRMZM2G169558_P01
Protein kinase APK1A (357 aa)
           
  0.530
umc2378
LOC100285589 (406 aa)
           
  0.530
WIP1
Bowman-Birk type wound-induced proteinase inhibitor WIP1 Precursor (102 aa)
           
  0.465
tsa1
Tryptophan synthase alpha (319 aa)
           
  0.402
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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