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STRINGSTRING
pco105342b protein (Zea mays) - STRING interaction network
"pco105342b" - Zinc knuckle in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco105342bZinc knuckle (CCHC-type) family protein; DNA-binding protein HEXBP; DNA-binding protein HEXBP isoform 1; DNA-binding protein HEXBP isoform 2; Uncharacterized protein (261 aa)    
Predicted Functional Partners:
GRMZM2G047949_P01
DExH-box ATP-dependent RNA helicase DExH10 (979 aa)
     
 
  0.808
103638180
DExH-box ATP-dependent RNA helicase DExH9 (1004 aa)
     
 
  0.808
GRMZM5G890815_P01
annotation not available (942 aa)
     
 
  0.557
100278145
Nucleotidyltransferase family protein (1447 aa)
     
 
  0.557
103647943
annotation not available (918 aa)
     
 
  0.557
103651371
annotation not available (260 aa)
     
 
  0.557
103639449
Nucleotidyltransferase (1316 aa)
     
 
  0.557
GRMZM2G077922_P01
Uncharacterized protein (104 aa)
     
 
  0.557
GRMZM2G070312_P02
PAP/OAS1 substrate-binding domain superfamily (474 aa)
     
 
  0.557
pco079591
PAP/OAS1 substrate-binding domain superfamily (1056 aa)
     
 
  0.557
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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