STRINGSTRING
gras2 protein (Zea mays) - STRING interaction network
"gras2" - Scarecrow-like protein 3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gras2Scarecrow-like protein 3 (449 aa)    
Predicted Functional Partners:
ARF11
Hypothetical protein LOC100383168 ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (688 aa)
           
  0.720
GRMZM2G177928_P01
Strictosidine synthase (398 aa)
           
  0.626
GRMZM5G828179_P01
Uncharacterized protein (354 aa)
       
 
  0.567
GRMZM2G151309_P01
DNA binding protein (LOC100284596), mRNA (437 aa)
       
 
  0.567
ARF16
Auxin response factor 6; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (914 aa)
           
  0.567
ARF17
Hypothetical protein LOC100272511 ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (644 aa)
           
  0.566
arf10
Hypothetical protein LOC100274571 (LOC100274571), mRNA; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (822 aa)
           
  0.563
gpm243b
LOC542697 (612 aa)
       
      0.499
pco148979b
LOC542199 (588 aa)
       
      0.499
AI987507
LOC542198 (518 aa)
       
      0.499
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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