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STRINGSTRING
GRMZM2G129209_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G129209_P01" - Omega-3 fatty acid desaturase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G129209_P01Omega-3 fatty acid desaturase (407 aa)    
Predicted Functional Partners:
100101547
Omega-6 fatty acid desaturase chloroplastic (452 aa)
   
 
0.779
100381692
Uncharacterized protein (480 aa)
   
   
  0.639
GRMZM5G812228_P03
ACS-like protein; Putative AMP-dependent synthetase and ligase superfamily protein (649 aa)
   
     
  0.571
GRMZM2G436593_P01
Mitochondrial 2-oxoglutarate/malate carrier protein ; Belongs to the mitochondrial carrier (TC 2.A.29) family (326 aa)
     
   
  0.557
GRMZM2G343149_P01
DNAJ heat shock N-terminal domain-containing protein; DnaJ domain containing protein; Uncharacterized protein (473 aa)
           
  0.555
100283265
3-oxoacyl-[acyl-carrier-protein] synthase ; Belongs to the beta-ketoacyl-ACP synthases family (461 aa)
     
   
  0.545
GRMZM2G012863_P01
3-oxoacyl-[acyl-carrier-protein] synthase I chloroplastic; Belongs to the beta-ketoacyl-ACP synthases family (481 aa)
     
   
  0.545
GRMZM2G175401_P01
Uncharacterized protein (302 aa)
     
   
  0.543
GRMZM2G097509_P01
Uncharacterized protein (263 aa)
     
   
  0.543
GRMZM2G430729_P01
annotation not available (496 aa)
 
       
  0.539
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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