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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ss5 protein (Zea mays) - STRING interaction network
"ss5" - Starch synthase V in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ss5Starch synthase V (701 aa)    
Predicted Functional Partners:
103645754
Uncharacterized protein (134 aa)
           
  0.951
100276554
Uncharacterized protein (243 aa)
           
  0.720
pco141696
Uncharacterized protein (239 aa)
           
  0.720
GRMZM2G082972_P04
Uncharacterized protein (180 aa)
           
  0.720
100193834
Uncharacterized protein (182 aa)
           
  0.720
tdsgR08H11
F-box/kelch-repeat protein (364 aa)
           
  0.706
umc1740
Seed specific protein Bn15D14A; Seed specific protein Bn15D14A isoform 1; Seed specific protein Bn15D14A isoform 2; Uncharacterized protein (397 aa)
           
  0.683
103627315
annotation not available (508 aa)
           
  0.653
100281740
RING/U-box superfamily protein; Protein binding protein; Uncharacterized protein (517 aa)
           
  0.653
100304255
RING/U-box superfamily protein (549 aa)
           
  0.653
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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