STRINGSTRING
cl5360_1 protein (Zea mays) - STRING interaction network
"cl5360_1" - LOC100282466 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5360_1LOC100282466 (190 aa)    
Predicted Functional Partners:
ms45
Hypothetical protein LOC100273898 (323 aa)
       
      0.633
GRMZM2G100620_P01
Hypothetical protein LOC100272589 (317 aa)
       
      0.633
Zm.96388
LOC100274429 (pco108434), mRNA (318 aa)
       
      0.551
IWS1.1
Transcription elongation factor A protein 2 (368 aa)
       
      0.551
Zm.10695
Calmodulin-binding heat-shock protein (452 aa)
           
  0.414
THX25
Hypothetical protein LOC100280076 (379 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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