• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
cl5360_1 protein (Zea mays) - STRING interaction network
"cl5360_1" - Gene trap locus 3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5360_1Gene trap locus 3; Uncharacterized protein (190 aa)    
Predicted Functional Partners:
GRMZM2G147500_P01
Afadin/alpha-actinin-binding protein (389 aa)
           
  0.720
100285075
Ubiquitin-fold modifier 1; Ubiquitin-like modifier (98 aa)
           
  0.719
103650755
annotation not available (1330 aa)
     
   
  0.708
pco114428
THO complex subunit 3 (346 aa)
     
   
  0.677
GRMZM2G030659_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (1065 aa)
     
   
  0.640
100277385
Protein-ribulosamine 3-kinase chloroplastic (342 aa)
           
  0.617
100273898
Hydroxyproline-rich glycoprotein family protein; Male sterile45; Splicing factor 3A subunit 2; Uncharacterized protein (323 aa)
       
      0.588
100272589
Hydroxyproline-rich glycoprotein family protein; Splicing factor 3A subunit 2; Uncharacterized protein (317 aa)
       
      0.588
100383816
Zn-dependent exopeptidase superfamily protein (429 aa)
           
  0.580
add1
Putative serine/threonine-protein phosphatase 2A regulatory subunit B’’ subunit TON2; Alternative discordia1 (205 aa)
     
   
  0.540
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]