STRINGSTRING
Zm.48436 protein (Zea mays) - STRING interaction network
"Zm.48436" - Cinnamoyl CoA reductase1 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.48436Cinnamoyl CoA reductase1 (371 aa)    
Predicted Functional Partners:
GRMZM2G139874_P01
Hypothetical protein LOC100272801 (501 aa)
   
  0.966
GRMZM2G100158_P01
Hypothetical protein LOC100273589 (532 aa)
   
  0.965
CAD
Probable cinnamyl alcohol dehydrogenase (CAD)(EC 1.1.1.195)(Brown-midrib 1 protein); Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol (367 aa)
     
 
  0.962
TIDP2701
Hypothetical protein LOC100279386 (440 aa)
     
  0.958
Zm.93933
LOC542166 (555 aa)
   
 
  0.951
Zm.32283
Mannitol dehydrogenase (432 aa)
         
  0.938
GRMZM2G090980_P01
Hypothetical protein LOC100192586 (354 aa)
         
  0.938
GRMZM2G174574_P02
Hypothetical protein LOC100280100 (550 aa)
       
  0.937
GRMZM2G145179_P01
4-coumarate--CoA ligase 2 (610 aa)
       
  0.937
GRMZM2G122787_P02
Hypothetical protein LOC100191850 (555 aa)
       
  0.937
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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