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STRINGSTRING
100281540 protein (Zea mays) - STRING interaction network
"100281540" - Ubiquitin-protein ligase/ zinc ion binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100281540Ubiquitin-protein ligase/ zinc ion binding protein (509 aa)    
Predicted Functional Partners:
pco141871
Ankyrin-1; Uncharacterized protein (417 aa)
       
 
  0.874
100304346
E3 ubiquitin-protein ligase UPL1 (3715 aa)
           
  0.826
103650479
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (849 aa)
           
  0.759
tdsgR99F01
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (707 aa)
           
  0.759
GRMZM2G536120_P01
Ankyrin repeat family protein (376 aa)
       
 
  0.723
100280256
Ankyrin-1 (456 aa)
       
 
  0.723
GRMZM2G028730_P02
ER membrane protein complex subunit 8/9-like protein (210 aa)
           
  0.716
GRMZM2G407913_P01
Embryo sac development arrest 7 (514 aa)
           
  0.709
103654528
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (821 aa)
           
  0.699
GRMZM2G411536_P03
annotation not available (3634 aa)
           
  0.653
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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