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STRINGSTRING
tdsgR47H12 protein (Zea mays) - STRING interaction network
"tdsgR47H12" - Pentatricopeptide repeat-containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdsgR47H12Pentatricopeptide repeat-containing protein (610 aa)    
Predicted Functional Partners:
100191393
Putative pentatricopeptide repeat-containing protein (695 aa)
           
  0.867
103648257
annotation not available (872 aa)
           
  0.769
AC207628.4_FGP003
Nuclear pore complex protein NUP96 (1822 aa)
     
   
  0.757
GRMZM2G114572_P01
Pentatricopeptide repeat-containing protein (582 aa)
           
  0.757
GRMZM2G053384_P01
annotation not available (696 aa)
           
  0.702
GRMZM2G444115_P01
PYK10-binding protein 2 (393 aa)
           
  0.657
103637971
Pentatricopeptide repeat protein2263 (787 aa)
           
  0.540
GRMZM2G020008_P01
Putative pentatricopeptide repeat-containing protein (594 aa)
           
  0.456
103646558
annotation not available (398 aa)
           
  0.433
GRMZM2G153456_P01
OSJNBa0055C08.12-like protein (401 aa)
           
  0.433
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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