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STRINGSTRING
gbp1 protein (Zea mays) - STRING interaction network
"gbp1" - GTP-binding protein homolog1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gbp1GTP-binding protein homolog1; Ras-related protein RHN1; Uncharacterized protein (248 aa)    
Predicted Functional Partners:
AY110141
Vacuolar protein sorting-associated protein 9A (483 aa)
     
 
  0.937
103653397
Phosphatidylinositol 3-kinase VPS34; Belongs to the PI3/PI4-kinase family (803 aa)
     
  0.929
103636262
Putative regulator of chromosome condensation (RCC1) family protein (959 aa)
     
 
  0.918
100193154
Transducin family protein / WD-40 repeat family protein (848 aa)
       
 
  0.882
GRMZM5G891724_P01
Vacuolar protein sorting-associated protein 9A (350 aa)
     
 
  0.876
GRMZM2G368350_P01
Vacuolar protein sorting-associated protein 9A (228 aa)
     
 
  0.876
GRMZM2G023401_P01
annotation not available (156 aa)
     
 
  0.876
100193933
Ras-related protein RHN1; Uncharacterized protein (203 aa)
   
 
 
0.872
GRMZM2G003734_P01
Vacuolar protein-sorting protein 33 ; Belongs to the STXBP/unc-18/SEC1 family (601 aa)
       
 
  0.845
100283772
Guanosine nucleotide diphosphate dissociation inhibitor; Rab GDP dissociation inhibitor alpha; Uncharacterized protein ; Belongs to the Rab GDI family (447 aa)
     
 
  0.836
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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