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GRAS58 protein (Zea mays) - STRING interaction network
"GRAS58" - Protein SHORT-ROOT 2-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAS58Protein SHORT-ROOT 2-like (630 aa)    
Predicted Functional Partners:
gras37
Hypothetical protein LOC100274320 (678 aa)
       
 
0.647
SCR
Protein SCARECROW (ZmSCR); Probable transcription factor involved in establishing and maintaining the correct radial pattern in the root apical meristem (668 aa)
       
 
0.646
GRAS54
Nodulation signaling pathway 2 protein (452 aa)
       
 
0.635
GRMZM5G828179_P01
Uncharacterized protein (354 aa)
       
 
  0.587
GRMZM2G151309_P01
DNA binding protein (LOC100284596), mRNA (437 aa)
       
 
  0.587
RBR3
Retinoblastoma-related protein 3 (ZmRBR3); Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity) (1010 aa)
       
 
  0.518
GRMZM2G016997_P01
Hypothetical protein LOC100217179 (1002 aa)
       
 
  0.518
wox5B
Putative wuschel homeobox protein (221 aa)
           
  0.461
wus1
WUS1 protein (wus1), mRNA (320 aa)
           
  0.457
wus2
WUS2 protein (325 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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