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Zm.19877 protein (Zea mays) - STRING interaction network
"Zm.19877" - Stem-specific protein TSJT1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.19877Stem-specific protein TSJT1 (247 aa)    
Predicted Functional Partners:
GRMZM2G473426_P01
Annotation not available (156 aa)
   
          0.423
GRMZM2G032494_P01
Annotation not available (245 aa)
   
          0.422
GRMZM2G313272_P01
Uncharacterized protein (742 aa)
   
          0.412
GRMZM2G112600_P02
Annotation not available (309 aa)
   
          0.411
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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