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ippi3 protein (Zea mays) - STRING interaction network
"ippi3" - Isopentenyl-diphosphate Delta-isomerase I-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ippi3Isopentenyl-diphosphate Delta-isomerase I-like (296 aa)    
Predicted Functional Partners:
pco148653
LOC100285558 (534 aa)
     
   
  0.878
GRMZM2G091456_P02
Hypothetical protein LOC100274333 (530 aa)
     
   
  0.878
GRMZM2G300238_P01
Uncharacterized LOC103642775 (499 aa)
   
   
  0.812
GRMZM5G801291_P01
Annotation not available (79 aa)
   
   
  0.811
GRMZM2G310957_P01
Annotation not available (250 aa)
   
   
  0.811
Y1
Phytoene synthase, chloroplastic Precursor (EC 2.5.1.32); Catalyzes the reaction from prephytoene diphosphate to phytoene (414 aa)
   
   
  0.811
PSY2
Phytoene synthase2 (402 aa)
   
   
  0.811
sqs1
Squalene synthase1 (401 aa)
   
   
  0.811
GRMZM2G091887_P02
Annotation not available (130 aa)
   
   
  0.811
GRMZM2G029396_P01
Hypothetical protein LOC100191601 (403 aa)
   
   
  0.811
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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