STRINGSTRING
Zm.5420 protein (Zea mays) - STRING interaction network
"Zm.5420" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5420Uncharacterized protein (150 aa)    
Predicted Functional Partners:
bsd2
Bundle sheath defective2 (129 aa)
     
        0.791
pco116159a
Triose phosphate/phosphate translocator, chloroplastic Precursor (cTPT) (404 aa)
     
        0.760
FTRC
Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic Precursor (FTR-C)(EC 1.18.-.-)(Ferredoxin-thioredoxin reductase subunit B)(FTR-B); Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin (152 aa)
     
        0.728
pco116928b
LOC100282000 (130 aa)
     
        0.601
TIDP3339
Hypothetical protein LOC100277720 (210 aa)
     
   
  0.553
GRMZM2G110294_P01
Hypothetical protein LOC100275314 (125 aa)
     
        0.499
Zm.15058
LOC100285398 (290 aa)
     
        0.494
Zm.8875
LOC100283244 (170 aa)
     
        0.487
GRMZM5G851051_P01
Hypothetical protein LOC100277231 (196 aa)
     
   
  0.482
GRMZM2G176129_P01
Uncharacterized protein (235 aa)
     
   
  0.482
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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