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STRINGSTRING
prl1 protein (Zea mays) - STRING interaction network
"prl1" - Brick1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prl1Brick1 (779 aa)    
Predicted Functional Partners:
tdsgR34B03
Protein C2-DOMAIN ABA-RELATED 4 (82 aa)
           
  0.799
cl11315_1a
Protein disulfide-isomerase LQY1 chloroplastic (154 aa)
     
 
  0.786
100272939
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family (201 aa)
     
   
  0.740
TIDP3584
Peptidase family M48 family protein (442 aa)
           
  0.737
TIDP3100
ATP-dependent Clp protease proteolytic subunit ; Belongs to the peptidase S14 family (292 aa)
           
  0.707
psbC
Photosystem II CP43 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (473 aa)
   
 
 
  0.700
cl5362_2b
Peptidase S24/S26A/S26B/S26C family protein (206 aa)
           
  0.699
GRMZM2G000710_P01
Peptidase S24/S26A/S26B/S26C family protein (207 aa)
           
  0.699
GRMZM2G101271_P01
annotation not available (490 aa)
     
 
  0.680
prep2
annotation not available (291 aa)
     
 
  0.680
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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