STRINGSTRING
umc1467 protein (Zea mays) - STRING interaction network
"umc1467" - Hypothetical protein LOC100382106 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1467Hypothetical protein LOC100382106 (437 aa)    
Predicted Functional Partners:
pco069598
Hypothetical protein LOC100191902 (306 aa)
       
      0.587
GRMZM2G119546_P01
Hypothetical protein LOC100272765 (306 aa)
       
      0.587
GRMZM2G038195_P01
Hypothetical protein LOC100273101 (306 aa)
       
      0.587
Zm.89694
Gda-1 (LOC100282537), mRNA (365 aa)
     
   
  0.543
Zm.84668
Gda-1 (322 aa)
     
   
  0.543
GRMZM5G860590_P01
Putative uncharacterized protein (297 aa)
           
  0.531
GRMZM2G071154_P01
Hypothetical protein LOC100191256 (365 aa)
           
  0.531
AC207342.3_FGP008
Putative uncharacterized protein (342 aa)
           
  0.531
GRMZM5G812921_P01
Protein binding protein (LOC100280668), mRNA (492 aa)
           
  0.457
pco131778b
LOC542609 (481 aa)
           
  0.426
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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