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STRINGSTRING
Atg8e protein (Zea mays) - STRING interaction network
"Atg8e" - Autophagy 8e variant 1Autophagy-protein 8 isoform 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atg8eAutophagy 8e variant 1Autophagy-protein 8 isoform 1; Autophagy 8e variant 1Autophagy-protein 8 isoform 2; Autophagy 8e variant 1Autophagy-protein 8 isoform 3; Autophagy-related 8d variant 1; Autophagy-related protein 8 ; Belongs to the ATG8 family (119 aa)    
Predicted Functional Partners:
Atg7
Autophagy 7; Autophagy-related 7 (1021 aa)
     
  0.994
Atg4b
Cysteine protease; Autophagy 4b variant 3; Uncharacterized protein (492 aa)
     
  0.990
Atg4a
Cysteine protease; Autophagy-related 4 variant 1; Cysteine protease ATG4B; Uncharacterized protein (492 aa)
     
  0.986
100275089
Protein NBR1-like protein (842 aa)
     
 
  0.983
GRMZM2G056645_P01
Protein SPIRRIG (2552 aa)
     
 
  0.980
pco096794a
Autophagy-related protein 3 (311 aa)
     
  0.975
GRMZM2G063355_P01
annotation not available (233 aa)
     
  0.975
nbr1b
annotation not available (834 aa)
       
 
  0.973
atg18e
Uncharacterized protein (371 aa)
     
 
  0.908
100193785
AAA-type ATPase family protein / ankyrin repeat family protein (485 aa)
     
 
  0.900
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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