STRINGSTRING
LIM7 protein (Zea mays) - STRING interaction network
"LIM7" - Hypothetical protein LOC100381874 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIM7Hypothetical protein LOC100381874 (207 aa)    
Predicted Functional Partners:
nac104
Protein CUP-SHAPED COTYLEDON 3-like (296 aa)
           
  0.721
GRMZM2G331833_P03
Hypothetical protein LOC100272778 (263 aa)
           
  0.721
Zm.86249
Putative uncharacterized protein (319 aa)
           
  0.721
GRMZM2G140817_P01
Hypothetical protein LOC100274274 (512 aa)
           
  0.720
Zm.27773
Uncharacterized LOC103630726 (1832 aa)
           
  0.613
GRMZM2G161587_P01
Hypothetical protein LOC100285581 (640 aa)
           
  0.531
pco137268b
Hypothetical protein LOC100192091 (454 aa)
           
  0.529
Zm.122773
Response regulator 10 (686 aa)
           
  0.406
KAPP
Kinase associated protein phosphatase (583 aa)
           
  0.405
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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