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pco114009a protein (Zea mays) - STRING interaction network
"pco114009a" - Pre-mRNA-splicing factor PRP17 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco114009aPre-mRNA-splicing factor PRP17; Uncharacterized protein (445 aa)    
Predicted Functional Partners:
GRMZM2G494600_P01
annotation not available (487 aa)
     
 
  0.984
GRMZM2G121776_P01
Putative RNA helicase family protein (639 aa)
     
 
  0.971
103647704
annotation not available (1450 aa)
     
 
  0.969
AC203535.4_FGP001
CDC5 protein (925 aa)
     
 
  0.962
TIDP3207
Zinc finger CCCH domain-containing protein 4 (493 aa)
     
 
  0.962
100217127
Tetratricopeptide repeat (TPR)-like superfamily protein (928 aa)
     
 
  0.961
GRMZM2G060160_P01
annotation not available (740 aa)
     
 
  0.961
100383562
CBF1-interacting co-repressor CIR N-terminal (504 aa)
     
 
  0.956
100286002
Pre-mRNA-splicing factor prp45 (609 aa)
     
 
  0.955
GRMZM6G829919_P01
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (65 aa)
     
 
  0.951
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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