STRINGSTRING
pco091513b protein (Zea mays) - STRING interaction network
"pco091513b" - LOC100283254 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco091513bLOC100283254 (303 aa)    
Predicted Functional Partners:
GRMZM2G006806_P01
Hypothetical protein LOC100273452 (198 aa)
           
  0.533
pco078615
Hypothetical protein LOC100216776 (364 aa)
           
  0.459
Zm.91240
LOC100282077 (311 aa)
           
  0.459
Zm.94708
Hypothetical protein LOC100384823 (451 aa)
           
  0.457
GRMZM2G145085_P01
Transcription initiation factor IIF subunit alpha-like (531 aa)
           
  0.414
pco081507
LOC100282440 (531 aa)
           
  0.414
GRMZM2G090262_P01
CPL3 (533 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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