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HOX1A protein (Zea mays) - STRING interaction network
"HOX1A" - Putative uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOX1APutative uncharacterized protein ; Interacts with the shrunken (SHR) 26 bp feedback control element (442 aa)    
Predicted Functional Partners:
PHD13
LOC100281389 (558 aa)
           
  0.721
knox3
KNOX1 domain containing protein (193 aa)
           
  0.569
knox7
Homeobox protein knotted-1-like 7 Fragment (363 aa)
           
  0.565
GRMZM2G007590_P01
Spliceosomal protein (233 aa)
           
  0.562
KNOX6
Homeobox protein knotted-1-like 7 Fragment (310 aa)
           
  0.529
lg4b
Homeobox protein knotted-1-like 5 Fragment (298 aa)
           
  0.527
GRMZM2G151087_P02
Hypothetical protein LOC100274548 (221 aa)
           
  0.527
grf2
14-3-3-like protein GF14-12 (900 aa)
           
  0.525
KN-1
Homeotic protein knotted-1 ; Possible transcription factor that regulates genes involved in development. Mutations in KN-1 alter leaf development. Foci of cells along the lateral vein do not differentiate properly but continue to divide, forming knots. May participate in the switch from indeterminate to determinate cell fates. Probably binds to the DNA sequence 5’-TGAC-3’ (359 aa)
           
  0.525
RAMDAZC7
Cystatin-1 Precursor (Cystatin I)(Corn kernel cysteine proteinase inhibitor) (135 aa)
           
  0.469
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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