STRINGSTRING
pco116085 protein (Zea mays) - STRING interaction network
"pco116085" - LOC100284053 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco116085LOC100284053 (354 aa)    
Predicted Functional Partners:
Zm.17763
Uncharacterized protein (939 aa)
     
      0.998
GRMZM2G139198_P02
Partner of Nob1 (240 aa)
     
 
  0.998
CL13054_1
Hypothetical protein LOC100274503 (220 aa)
     
 
  0.998
pco061701
Hypothetical protein LOC100274326 (461 aa)
     
 
  0.998
Zm.4126
Small nucleolar ribonucleoprotein complex subunit (537 aa)
     
      0.995
Zm.12340
Hypothetical protein LOC100383975 (LOC100383975), mRNA; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (391 aa)
     
 
  0.995
GRMZM2G056350_P01
MKI67 FHA domain-interacting nucleolar phosphoprotein-like (215 aa)
     
 
  0.992
GRMZM2G028672_P01
Uncharacterized protein (164 aa)
     
 
  0.991
GRMZM2G477632_P01
Uncharacterized protein (115 aa)
   
 
  0.991
rpl10
Hypothetical protein LOC100194040 (231 aa)
   
 
  0.991
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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