STRINGSTRING
aba1 protein (Zea mays) - STRING interaction network
"aba1" - Abscisic stress protein homolog in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aba1Abscisic stress protein homolog (aba1), mRNA (138 aa)    
Predicted Functional Partners:
abi3
B3 DNA binding domain containing protein (449 aa)
           
  0.528
HrBP1
Hypothetical protein LOC100383635 (272 aa)
           
  0.472
LIM5
Zinc ion binding protein (504 aa)
           
  0.465
ABI2
Abl-interactor 2 (404 aa)
           
  0.461
GRMZM2G432480_P02
Phosphate import ATP-binding protein pstB 1 (341 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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