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542087 protein (Zea mays) - STRING interaction network
"542087" - Nucleosome/chromatin assembly factor group C in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
542087Nucleosome/chromatin assembly factor group C; Uncharacterized protein (453 aa)    
Predicted Functional Partners:
hda101
Probable histone deacetylase 19; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity) (517 aa)
     
 
  0.919
100194325
Chromatin assembly factor 1 subunit B; Uncharacterized protein (506 aa)
     
 
  0.893
rpd3
Histone deacetylase (700 aa)
     
 
  0.888
hda108
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (458 aa)
     
 
  0.858
vef101a
Embryonic flower 2; VEF family protein (626 aa)
     
 
  0.850
gpm623
Polycomb group protein EMBRYONIC FLOWER 2 (607 aa)
     
 
  0.850
fie2
Polycomb group protein FIE2; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility (By similarity) (401 aa)
     
 
  0.849
fie1
Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility (By similarity); Belongs to the WD repeat ESC family (461 aa)
     
 
  0.849
GRMZM2G135966_P01
annotation not available (708 aa)
     
 
  0.841
HAT1
Histone acetyltransferase type B catalytic subunit; Acetylates newly synthesized histones during DNA replication. Highly specific in vitro for the non-acetylated H4 which is acetylated sequentially at ’Lys-12’ and ’Lys-5’ into a di-acetylated form (468 aa)
     
 
  0.832
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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