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STRINGSTRING
dof40 protein (Zea mays) - STRING interaction network
"dof40" - DOF40 C2C2-DOF type transcription factor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dof40DOF40 C2C2-DOF type transcription factor (450 aa)    
Predicted Functional Partners:
CCT
CO CO-LIKE TIMING OF CAB1 protein domain1 (240 aa)
     
   
  0.731
PIL5
PIL5 (562 aa)
     
   
  0.687
103627634
annotation not available (530 aa)
           
  0.597
tdsgR61E08
Reticulon-like protein (616 aa)
           
  0.560
100281091
Circadian clock associated1; Putative MYB DNA-binding domain superfamily protein (720 aa)
     
   
  0.549
GRMZM2G165422_P01
Putative receptor-like protein kinase (854 aa)
           
  0.547
103632181
annotation not available (675 aa)
           
  0.542
103634904
Putative MYB DNA-binding domain superfamily protein (347 aa)
           
  0.542
tdsgR62H09
LRR receptor-like serine/threonine-protein kinase EFR; Putative leucine-rich repeat receptor-like protein kinase family protein (859 aa)
           
  0.542
100383969
Sodium/hydrogen exchanger 7 (1228 aa)
           
  0.538
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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