STRINGSTRING
GRMZM2G138494_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G138494_P01" - Hypothetical protein LOC100272611 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G138494_P01Hypothetical protein LOC100272611 (LOC100272611), mRNA (453 aa)    
Predicted Functional Partners:
pco118077
Hypothetical protein LOC100382195 (686 aa)
       
      0.595
GRMZM2G376705_P01
Annotation not available (161 aa)
     
   
  0.453
tac905.45
Annotation not available (137 aa)
     
   
  0.453
GRMZM2G149865_P01
Hypothetical protein LOC100280406 (472 aa)
     
   
  0.453
rad1
Hypothetical protein LOC100192883 (1851 aa)
     
   
  0.441
Zm.104093
Uncharacterized protein (917 aa)
     
   
  0.419
Zm.86120
Hypothetical protein LOC100278565 (721 aa)
     
   
  0.419
GRMZM2G124284_P01
Uncharacterized protein (197 aa)
     
   
  0.408
GRMZM2G083745_P01
Ribosomal RNA methyltransferase 1 ; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (318 aa)
     
   
  0.408
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]