STRINGSTRING
Zm.14075 protein (Zea mays) - STRING interaction network
"Zm.14075" - Fiber protein Fb15 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.14075Fiber protein Fb15 (91 aa)    
Predicted Functional Partners:
GRMZM2G105996_P01
ADP-ribosylation factor 1 (181 aa)
     
   
  0.636
AUX3
Hypothetical protein LOC100193444 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (220 aa)
           
  0.570
cl58279_1
LOC100284203 (297 aa)
           
  0.530
pco131734
LOC100286091 (279 aa)
           
  0.529
Zm.123287
Outer mitochondrial membrane protein porin (276 aa)
           
  0.529
Zm.122797
caffeoyl-CoA O-methyltransferase 1 (246 aa)
           
  0.529
GRMZM2G401139_P01
Putative uncharacterized proteinUbiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C ; (72 aa)
     
        0.424
GRMZM2G143234_P02
LOC100283198 (128 aa)
     
        0.419
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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