STRINGSTRING
pco066389 protein (Zea mays) - STRING interaction network
"pco066389" - LOC100283412 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco066389LOC100283412 (346 aa)    
Predicted Functional Partners:
GRMZM5G872217_P01
Single-stranded TG1-3 DNA-binding protein-like (376 aa)
     
        0.843
Zm.157035
Hypothetical protein LOC100381740 (LOC100381740), mRNA (287 aa)
     
        0.843
pco083390
Hypothetical protein LOC100216667 (293 aa)
     
        0.804
Zm.10400
Uncharacterized protein (478 aa)
     
        0.803
GRMZM2G169996_P01
Annotation not available (71 aa)
     
        0.803
GRMZM2G134059_P01
Annotation not available (71 aa)
     
        0.803
GRMZM2G107673_P01
Annotation not available (64 aa)
     
        0.803
AC208327.4_FGP003
Hypothetical protein LOC100217083 (481 aa)
     
        0.803
Zm.15935
Hypothetical protein LOC100192696 ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
        0.802
GRMZM5G845775_P01
Uncharacterized protein (392 aa)
     
        0.797
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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