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GRMZM2G139396_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G139396_P01" - Pectate lyase 1-like in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G139396_P01Pectate lyase 1-like (376 aa)    
Predicted Functional Partners:
GRMZM5G858659_P01
Annotation not available (190 aa)
 
     
  0.484
GRMZM2G071511_P02
Annotation not available (354 aa)
 
     
  0.484
cl5577_1a
Hypothetical protein LOC100192787 (341 aa)
 
     
  0.483
Zm.39920
Putative uncharacterized protein (599 aa)
 
     
  0.474
GRMZM2G410783_P01
Annotation not available (505 aa)
 
     
  0.472
Zm.3801
Hypothetical protein LOC100277001 (389 aa)
 
     
  0.460
GRMZM2G455564_P01
Probable pectinesterase 8 (426 aa)
 
     
  0.457
GRMZM2G158240_P01
Pectinesterase-2 (578 aa)
 
     
  0.457
cl55825_1b
Hypothetical protein LOC100280019 (346 aa)
 
     
  0.456
GRMZM2G008593_P01
Pectinesterase-2 ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (557 aa)
 
     
  0.455
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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