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STRINGSTRING
yy1 protein (Zea mays) - STRING interaction network
"yy1" - Yin-yang1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yy1Yin-yang1 (320 aa)    
Predicted Functional Partners:
100217154
Mediator of RNA polymerase II transcription subunit 18 (217 aa)
       
 
  0.883
cl30708_1
Nuclear matrix protein 1 (328 aa)
           
  0.682
umc1614
Chromatin structure-remodeling complex protein SYD (2594 aa)
     
 
  0.591
trm1
Thioredoxin M-type, chloroplastic; Participates in various redox reactions through the reversible oxidation of the active center dithiol to a disulfide. The M form is known to activate NADP-malate dehydrogenase (By similarity) (174 aa)
       
 
  0.591
fie2
Polycomb group protein FIE2; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility (By similarity) (401 aa)
       
 
  0.584
fie1
Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility (By similarity); Belongs to the WD repeat ESC family (461 aa)
       
 
  0.584
103653397
Phosphatidylinositol 3-kinase VPS34; Belongs to the PI3/PI4-kinase family (803 aa)
     
 
  0.576
GRMZM2G432566_P02
RING/U-box superfamily protein (843 aa)
           
  0.565
spr9
Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity) (148 aa)
       
 
  0.563
parp1
Poly [ADP-ribose] polymerase (267 aa)
       
 
  0.562
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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