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pco138572 protein (Zea mays) - STRING interaction network
"pco138572" - Hypothetical protein LOC100272977 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco138572Hypothetical protein LOC100272977 (199 aa)    
Predicted Functional Partners:
Zm.12340
Hypothetical protein LOC100383975 (LOC100383975), mRNA; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (391 aa)
     
  0.970
GRMZM2G139198_P02
Partner of Nob1 (240 aa)
     
    0.929
CL13054_1
Hypothetical protein LOC100274503 (220 aa)
     
    0.929
cl9362_1
LOC100283525 (281 aa)
     
        0.921
GRMZM2G146761_P01
Putative uncharacterized protein (287 aa)
     
        0.916
GRMZM2G080129_P01
Hypothetical protein LOC100382121 (287 aa)
     
        0.916
Zm.24056
Ribosome biogenesis protein BMS1 homolog (725 aa)
     
 
  0.912
GRMZM2G121785_P01
U3 small nucleolar RNA-associated protein 11 ; Involved in nucleolar processing of pre-18S ribosomal RNA (232 aa)
     
 
    0.911
GRMZM5G811567_P01
Uncharacterized protein (414 aa)
     
 
    0.906
GRMZM2G083580_P02
Hypothetical protein LOC100383059 (541 aa)
     
 
    0.906
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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