STRINGSTRING
Zm.12896 protein (Zea mays) - STRING interaction network
"Zm.12896" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.12896Uncharacterized protein (333 aa)    
Predicted Functional Partners:
Zm.27794
Trigger factor-like protein TIG, Chloroplastic (528 aa)
     
   
  0.612
y9
Hypothetical protein LOC100194203 ; Isomerase involved in the biosynthesis of carotenoids. Catalyzes the cis- to trans-conversion of the 15-cis-bond in 9,15,9’-tri-cis-zeta-carotene (366 aa)
   
          0.508
GRMZM2G145908_P01
Annotation not available (66 aa)
   
          0.505
GRMZM2G442064_P01
Annotation not available (66 aa)
   
          0.499
GRMZM2G464328_P01
Hypothetical protein LOC100273248 (271 aa)
   
          0.487
GRMZM2G002756_P01
ATP-dependent Clp protease adaptor protein ClpS containing protein (160 aa)
   
          0.483
GRMZM2G032721_P01
Plastid-specific 30S ribosomal protein 3 (LOC100282135), mRNA (82 aa)
   
        0.478
GRMZM2G361569_P01
Hypothetical protein LOC100193993 (177 aa)
   
        0.465
GRMZM2G459391_P02
ATP-dependent Clp protease adaptor protein ClpS containing protein (160 aa)
   
          0.463
GRMZM2G022876_P01
Permeases of the major facilitator superfamily (244 aa)
   
        0.441
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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