STRINGSTRING
pco085001 protein (Zea mays) - STRING interaction network
"pco085001" - LOC100282002 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco085001LOC100282002 (210 aa)    
Predicted Functional Partners:
GRMZM2G008647_P02
Hypothetical protein LOC100192937 (LOC100192937), mRNA (186 aa)
   
 
 
  0.738
GRMZM2G082886_P01
Thioredoxin H-type (120 aa)
   
 
 
  0.729
trh2
Thioredoxin h homolog2 (122 aa)
   
 
 
  0.725
LOC541940
Uncharacterized protein (157 aa)
   
 
 
  0.723
trxh1
Thioredoxin h1 protein (128 aa)
   
 
 
  0.720
GRMZM2G170845_P01
Annotation not available (177 aa)
   
 
 
  0.719
GRMZM2G136522_P01
Hypothetical protein LOC100216789 (523 aa)
     
 
  0.707
RPS17
30S ribosomal protein S17, chloroplastic Precursor ; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (132 aa)
     
        0.687
Zm.79053
Thioredoxin H5-like (128 aa)
   
 
 
  0.678
GRMZM2G150091_P01
Hypothetical protein LOC100193620 (126 aa)
   
 
 
  0.678
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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