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STRINGSTRING
gpm885 protein (Zea mays) - STRING interaction network
"gpm885" - Seed maturation protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm885Seed maturation protein (216 aa)    
Predicted Functional Partners:
103636627
Protein CURVATURE THYLAKOID 1C chloroplastic (152 aa)
       
      0.762
GRMZM2G115646_P01
annotation not available (842 aa)
       
      0.762
103629287
Ras-related protein RABD1 (205 aa)
       
 
  0.744
GRMZM2G108258_P02
GTP-binding protein YPTM1; Protein transport. Probably involved in vesicular traffic (By similarity) (243 aa)
       
 
  0.744
100283096
Seed maturation protein (243 aa)
       
   
0.742
100217189
Reticulon-like protein (255 aa)
       
   
0.742
100193984
GTP cyclohydrolase 1 (475 aa)
       
      0.720
umc2756
LYST-interacting protein 5-like protein (477 aa)
       
      0.720
cl581_1
GTP cyclohydrolase I 1 (476 aa)
       
      0.720
GRMZM2G047178_P01
LYST-interacting protein 5-like protein (559 aa)
       
      0.720
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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