STRINGSTRING
Zm.16954 protein (Zea mays) - STRING interaction network
"Zm.16954" - DNA polymerase theta in Zea mays
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.16954DNA polymerase theta (546 aa)    
Predicted Functional Partners:
GRMZM2G081519_P02
Hypothetical protein LOC100280411 (361 aa)
 
  0.812
IDP264
Hypothetical protein LOC100381439 (826 aa)
   
  0.758
GRMZM5G827798_P01
Uncharacterized protein (380 aa)
   
  0.758
GRMZM2G398668_P02
Hypothetical protein LOC100383660 ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated f [...] (411 aa)
   
  0.758
Zm.24049
DNA repair protein UVH3 (1531 aa)
   
  0.758
FEN1
Putative uncharacterized protein ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated fl [...] (523 aa)
   
  0.758
GRMZM2G097898_P01
DNA polymerase I (422 aa)
   
  0.758
GRMZM2G069025_P01
Hypothetical protein LOC100383402 (638 aa)
   
  0.758
GRMZM2G021674_P01
XPG I-region family protein (688 aa)
   
  0.758
GRMZM2G004188_P01
Flap endonuclease GEN-like 1 (636 aa)
   
  0.758
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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