STRINGSTRING
Zm.20642 protein (Zea mays) - STRING interaction network
"Zm.20642" - Uncharacterized protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.20642Uncharacterized protein (84 aa)    
Predicted Functional Partners:
cl561_1
Magnesium-chelatase subunit ChlD, chloroplastic; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (755 aa)
   
 
  0.880
GRMZM2G159013_P01
Ferrochelatase-2 ; Catalyzes the ferrous insertion into protoporphyrin IX (547 aa)
   
 
  0.867
Zm.1691
Hypothetical protein LOC100191436 ; Catalyzes the ferrous insertion into protoporphyrin IX (589 aa)
   
 
  0.867
pco095974
Hypothetical protein LOC100216845 ; Catalyzes the ferrous insertion into protoporphyrin IX (476 aa)
   
 
  0.867
pco070684
LOC100284619 (356 aa)
   
   
  0.767
cf1
Hypothetical protein LOC100191140 (394 aa)
   
   
  0.767
GRMZM2G377609_P03
Hypothetical protein LOC100383208 (402 aa)
   
   
  0.766
GRMZM2G365644_P02
Uroporphyrinogen decarboxylase 1, chloroplastic-like (392 aa)
   
   
  0.766
GRMZM2G088533_P01
Annotation not available (120 aa)
   
   
  0.766
GRMZM2G046468_P01
Cysteine proteinase 1-like (391 aa)
   
   
  0.766
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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