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STRINGSTRING
GRMZM2G142413_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G142413_P01" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G142413_P01annotation not available (600 aa)    
Predicted Functional Partners:
103626522
annotation not available (791 aa)
     
        0.871
100284988
Transcription termination factor nusG family protein (336 aa)
     
   
  0.826
ERA1
GTPase ERA1, chloroplastic; Nuclear genome-encoded probable GTPase involved in ribosome biogenesis in chloroplasts. Plays a role in 16S rRNA maturation in plastids and may contribute to the assembly of the small (30S) ribosomal subunit (416 aa)
     
   
  0.777
100275885
Putative NAD(P)H dehydrogenase subunit CRR3 chloroplastic (168 aa)
     
   
  0.741
100383346
Uncharacterized protein (417 aa)
     
   
  0.714
100272896
Uncharacterized protein (392 aa)
     
   
  0.714
100383193
Protein plastid transcriptionally active 16 chloroplastic (496 aa)
     
   
  0.701
GRMZM2G122274_P01
annotation not available (368 aa)
           
  0.699
103643820
annotation not available (517 aa)
           
  0.699
WHY1
Single-stranded DNA-binding protein WHY1, chloroplastic; Single-stranded DNA and RNA binding protein that maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. Functions in RNA metabolism and is involved in the maturation of the atpF and 23S ribosomal RNAs; Belongs to the Whirly family (266 aa)
     
   
  0.656
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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