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pco156628 protein (Zea mays) - STRING interaction network
"pco156628" - Stem-specific protein TSJT1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco156628Stem-specific protein TSJT1 (302 aa)    
Predicted Functional Partners:
Zm.18116
SNF1-related protein kinase regulatory subunit beta-1 (285 aa)
     
        0.733
Zm.34145
RING-H2 finger protein ATL5A (206 aa)
           
  0.696
Zm.262
Translocon of outer membrane of chloroplast35 ; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (326 aa)
           
  0.566
Zm.81929
Metal ion binding protein (148 aa)
           
  0.530
Zm.21399
Metal ion binding protein (350 aa)
           
  0.530
GRMZM2G028134_P01
Metal ion binding protein (134 aa)
           
  0.530
nad2
NADH dehydrogenase subunit 2 (304 aa)
           
  0.529
Zm.12318
LOC100284891 (389 aa)
           
  0.529
Zm.32023
Retinol dehydrogenase 12 (LOC100285880), mRNA (361 aa)
           
  0.528
GRMZM2G121034_P01
Retinol dehydrogenase 12 (367 aa)
           
  0.528
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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