STRINGSTRING
COL2 protein (Zea mays) - STRING interaction network
"COL2" - Zinc finger protein CONSTANS-LIKE 16-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL2Zinc finger protein CONSTANS-LIKE 16-like (454 aa)    
Predicted Functional Partners:
Zm.22238
Lysine-specific demethylase REF6-like (1142 aa)
       
  0.746
jmj20
Hypothetical protein LOC100381553 (1522 aa)
       
  0.746
Zm.130314
Protein SHOOT GRAVITROPISM 5-like (448 aa)
       
  0.738
LOC542103
SET domain protein SDG117 (1601 aa)
     
  0.733
GRMZM2G125432_P01
Uncharacterized protein (1461 aa)
     
  0.733
atGRF5
Putative growth-regulating factor 3 (401 aa)
           
  0.721
pco069223a
Hypothetical protein LOC100273897 (623 aa)
           
  0.721
C2H133
Hypothetical protein LOC100193305 (354 aa)
       
  0.696
Zm.32364
Hypothetical protein LOC100304401 (599 aa)
       
  0.696
Zm.147617
Zinc finger protein ZAT6-like (178 aa)
       
  0.696
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (11%) [HD]