STRINGSTRING
pco085166 protein (Zea mays) - STRING interaction network
"pco085166" - Hypothetical protein LOC100276590 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco085166Hypothetical protein LOC100276590 (423 aa)    
Predicted Functional Partners:
pco106378a
LOC100283928 (199 aa)
       
    0.848
Zm.15791
RNA-binding protein 8A (198 aa)
       
    0.848
GRMZM2G072671_P01
RNA-binding protein 8A (196 aa)
       
    0.848
GRMZM5G802598_P01
Annotation not available (314 aa)
       
  0.786
Zm.64773
Uncharacterized protein (1088 aa)
       
  0.786
GRMZM2G398232_P01
Annotation not available (282 aa)
       
  0.786
GRMZM2G381799_P01
Annotation not available (485 aa)
       
  0.786
GRMZM2G379144_P01
Annotation not available (547 aa)
       
  0.786
GRMZM2G360416_P01
Annotation not available (282 aa)
       
  0.786
GRMZM2G325157_P01
Annotation not available (335 aa)
       
  0.786
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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