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AY109715 protein (Zea mays) - STRING interaction network
"AY109715" - Serine/arginine-rich SC35-like splicing factor SCL30 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AY109715Serine/arginine-rich SC35-like splicing factor SCL30 (83 aa)    
Predicted Functional Partners:
srp32
ASF/SF2-like pre-mRNA splicing factor SRP32 (285 aa)
     
 
  0.966
GRMZM2G331811_P03
Serine/arginine-rich-splicing factor SR34 (272 aa)
       
 
  0.964
magi9101
Splicing factor, arginine/serine-rich 7 (277 aa)
     
 
  0.929
pco074406
Arginine/serine-rich splicing factor RSZ28III (253 aa)
     
 
  0.929
GRMZM2G083975_P01
Uncharacterized protein (330 aa)
     
 
  0.915
GRMZM2G065284_P01
Uncharacterized protein (208 aa)
     
 
  0.915
magi26728
Arginine/serine-rich splicing factor RSP41 isoform 1; Arginine/serine-rich splicing factor RSP41 isoform 2; Arginine/serine-rich splicing factor RSP41 isoform 3; Uncharacterized protein (255 aa)
     
 
  0.890
SRP1
Arginine/serine-rich splicing factor 1 variant 3 isoform 3; Uncharacterized protein (223 aa)
     
 
  0.890
542693
Serine/arginine-rich splicing factor RS31A (239 aa)
     
 
  0.890
RS2Z37A
Serine/arginine-rich splicing factor RS2Z32 (325 aa)
     
 
  0.882
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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