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STRINGSTRING
100501079 protein (Zea mays) - STRING interaction network
"100501079" - LETM1-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100501079LETM1-like protein (766 aa)    
Predicted Functional Partners:
myb78
annotation not available (382 aa)
     
   
  0.733
100279602
Uncharacterized protein (271 aa)
       
 
  0.603
100037740
Putative MYB DNA-binding domain superfamily protein (382 aa)
     
   
  0.590
ARF16
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (914 aa)
           
  0.560
100273797
Putative transcriptional regulatory protein (306 aa)
     
   
  0.543
100280081
Putative isoaspartyl peptidase/L-asparaginase 3 (383 aa)
           
  0.539
GRMZM2G165939_P01
Developmentally-regulated GTP-binding protein 2 (245 aa)
     
   
  0.533
cl31549_1
Mitochondrion protein (221 aa)
       
 
  0.514
pco061228
Mitochondrial import receptor subunit TOM22 (94 aa)
           
  0.507
103627407
annotation not available (463 aa)
           
  0.504
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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