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HMG9 protein (Zea mays) - STRING interaction network
"HMG9" - Nucleosome/chromatin assembly factor D in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMG9Nucleosome/chromatin assembly factor D (123 aa)    
Predicted Functional Partners:
Zm.85337
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase (1161 aa)
           
  0.546
Zm.67016
Putative uncharacterized protein (1236 aa)
           
  0.545
Zm.28599
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 (387 aa)
     
   
  0.473
GRMZM2G464885_P01
Hypothetical protein LOC100192507 (314 aa)
     
        0.460
Zm.132899
Putative uncharacterized protein At4g01020, chloroplastic-like (1719 aa)
           
  0.436
GRMZM2G443256_P01
SMAD/FHA domain-containing family protein (710 aa)
           
  0.436
GRMZM2G437262_P01
Annotation not available (170 aa)
           
  0.436
Zm.2850
Uncharacterized protein (940 aa)
           
  0.436
GRMZM2G300375_P01
ATP-dependent RNA helicase DHX8 (692 aa)
           
  0.436
GRMZM2G105256_P01
Uncharacterized protein (683 aa)
           
  0.436
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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