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Zm.34149 protein (Zea mays) - STRING interaction network
"Zm.34149" - Hypothetical protein LOC100216940 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.34149Hypothetical protein LOC100216940 (LOC100216940), mRNA (555 aa)    
Predicted Functional Partners:
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
   
  0.954
GRMZM2G029450_P01
Annotation not available (883 aa)
     
  0.953
GRMZM2G390729_P01
Uncharacterized protein (446 aa)
     
  0.904
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
     
  0.897
Zm.124974
UBiQuitin family member (143 aa)
     
  0.897
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
   
  0.862
GRMZM2G454261_P01
Annotation not available (104 aa)
     
  0.842
GRMZM2G376619_P01
Uncharacterized protein (266 aa)
     
  0.842
GRMZM2G122185_P01
Crooked neck-like protein 1 (425 aa)
     
  0.835
Zm.35941
Uncharacterized protein (769 aa)
     
  0.835
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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