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pbf1 protein (Zea mays) - STRING interaction network
"pbf1" - Dof zinc finger protein PBF in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbf1Dof zinc finger protein PBF; Transcription factor that binds specifically to a 5’- AA[AG]G-3’ consensus core sequence. May enhance the DNA binding of the bZIP transcription factor Opaque-2 to O2 binding site elements (325 aa)    
Predicted Functional Partners:
LOC542296
Glutelin-2; Seed storage protein. It accounts for about 15% of the total endosperm protein content (223 aa)
     
   
  0.811
dzs18
18kD delta zein; Delta zein storage protein; Delta zein structural18; Prolamin; Uncharacterized protein (211 aa)
     
   
  0.792
o2
Regulatory protein opaque-2; Involved in the regulation of the endosperm-specific production of albumin b-32 and other zein proteins. It is a trans- acting transcriptional activator that binds to the consensus sequence 5’-GATGAYRTGR-3’; Belongs to the bZIP family (456 aa)
     
   
  0.780
100279595
Transcription factor TCP14 (379 aa)
       
 
  0.701
tcptf9
Transcription factor TCP14 (402 aa)
       
 
  0.701
TCP26
annotation not available (400 aa)
       
 
  0.701
bZIP128
Opaque2 heterodimerizing protein 1 (405 aa)
           
  0.697
100273084
Lysine ketoglutarate reductase trans-splicing 1; Lysine ketoglutarate reductase trans-splicing related 1; Uncharacterized protein (401 aa)
           
  0.690
pco119368
Cyclin-dependent kinase inhibitor 2 (263 aa)
           
  0.586
606441
Cyclin-dependent kinase inhibitor 2 (253 aa)
           
  0.586
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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