STRINGSTRING
Zm.143786 protein (Zea mays) - STRING interaction network
"Zm.143786" - NAC transcription factor NAM-1-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.143786NAC transcription factor NAM-1-like (252 aa)    
Predicted Functional Partners:
EREB212
Hypothetical protein LOC100381947 (265 aa)
           
  0.629
GRMZM2G039381_P01
Uncharacterized protein (111 aa)
           
  0.629
Zm.29941
Transport inhibitor response 1-like protein Os05g0150500 (590 aa)
           
  0.568
myb74
Transcription factor GAMYB (492 aa)
           
  0.530
MYB101
Myb-like protein AA (406 aa)
           
  0.529
ARF18
Putative uncharacterized protein ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (739 aa)
           
  0.529
myb138
Hypothetical protein LOC100191731 (559 aa)
           
  0.523
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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