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GRMZM2G146490_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G146490_P01" - DNA repair protein XRCC1 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G146490_P01DNA repair protein XRCC1 (351 aa)    
Predicted Functional Partners:
DP2
Diphosphonucleotide phosphatase 2 (512 aa)
     
  0.982
Zm.148561
Transcription factor bHLH140 (791 aa)
       
  0.976
GRMZM2G078389_P01
Uncharacterized LOC103643340 (528 aa)
       
  0.918
GRMZM5G833563_P01
Hypothetical protein LOC100383279 (552 aa)
       
  0.890
GRMZM2G379754_P02
Annotation not available (180 aa)
     
  0.781
GRMZM2G134529_P02
Annotation not available (180 aa)
     
  0.781
GRMZM2G099048_P05
Hypothetical protein LOC100279392 (308 aa)
     
  0.781
GRMZM2G097605_P01
DNA repair helicase UVH6 (758 aa)
     
 
  0.767
GRMZM2G008524_P01
Annotation not available (137 aa)
     
 
  0.767
Zm.102753
Mre11B protein (719 aa)
     
 
  0.749
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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