• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
103653419 protein (Zea mays) - STRING interaction network
"103653419" - Pentatricopeptide repeat-containing protein mitochondrial in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
103653419Pentatricopeptide repeat-containing protein mitochondrial (700 aa)    
Predicted Functional Partners:
bHLH105
DNA binding protein (332 aa)
           
  0.457
bHLH161
Transcription factor bHLH99 (352 aa)
           
  0.457
bHLH33
BHLH transcription factor; DNA binding protein (333 aa)
           
  0.457
IDP1980
Transcription factor bHLH99; Putative HLH DNA-binding domain superfamily protein; Uncharacterized protein (345 aa)
           
  0.457
pco142929
Ribosomal protein S15 containing protein; Uncharacterized protein (432 aa)
     
   
  0.432
100273039
S15/NS1 RNA-binding protein (436 aa)
     
   
  0.432
103637670
annotation not available (655 aa)
     
   
  0.401
tdsgR78G04
Uncharacterized protein (654 aa)
     
   
  0.401
IDP507
Protein kinase G11A; Uncharacterized protein (685 aa)
     
   
  0.401
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]